Motif IL_08061.1 Version IL_08061.1 of this group appears in releases 3.2 to 3.7

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Pairwise interactions
Sequence variants
History

#S	Loop id	PDB	Disc	#Non-core	Chain(s)	Standardized name		1		2		3		4		5		6	break		7		8		9		10		11	1-11	6-7
1	IL_5KPY_002	5KPY	0	3	A	5-hydroxytryptophan RNA aptamer	G	47	A	48	U	51	G	52	U	54	G	55	*	C	71	U	72	A	73	A	74	C	75	cWW	cWW

3D structures

Complete motif including flanking bases

Sequence	Counts
GAAUUGUUG*CUAAC	1

Non-Watson-Crick part of the motif

Sequence	Counts
AAUUGUU*UAA	1

Release history

Release	3.3	3.4	3.5	3.6	3.7	3.2
Date	2018-03-08	2018-04-06	2018-05-04	2018-06-01	2018-06-29	2018-09-26
Status	Exact match	Exact match	Exact match	Exact match	Exact match	New id, no parents

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.

Annotations: (1)
Basepair signature: cWW-L-R-R-R-L-L-L-cWW
Heat map statistics: Min 0.00 | Avg 0.00 | Max 0.00

Help

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view

reading 1076 atoms

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3 models in this collection. Use getProperty "modelInfo" or getProperty "auxiliaryInfo" to inspect them.

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1076 atoms created

ModelSet: autobonding; use autobond=false to not generate bonds automatically

Time for creating model: 52 ms

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3 models

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Coloring options: Nucleotide numbers

Motif IL_08061.1 Version IL_08061.1 of this group appears in releases 3.2 to 3.7 Download Csv Json

3D structures

Complete motif including flanking bases

Non-Watson-Crick part of the motif

Release history

Parent motifs

Children motifs

Motif IL_08061.1 Version IL_08061.1 of this group appears in releases 3.2 to 3.7

Download

Csv

Json