Motif IL_08173.1 Version IL_08173.1 of this group appears in releases 2.0 to 2.0
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | break | 3 | 4 | 5 | 1-2 | 1-5 | 2-3 | 3-5 | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_1XJR_004 | 1XJR | 0.0000 | 1 | 180 degree turn | A | s2m RNA | G | 19 | C | 20 | * | G | 28 | A | 29 | C | 31 | ncsS | cWW | cWW | ncsS |
| 2 | IL_3J79_110 | 3J79 | 0.8014 | 2 | A | LSU rRNA | U | 3360 | A | 3362 | * | U | 3376 | A | 3377 | A | 3379 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GC*GAUC | 1 |
| UUA*UACA | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| *AU | 1 |
| U*AC | 1 |
Release history
| Release | 2.0 |
|---|---|
| Date | 2017-04-24 |
| Status | New id, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- 180 degree turn (1)
- (1)
- Basepair signature
- cWW-cSS-cSS-R-cWW
- Heat map statistics
- Min 0.80 | Avg 0.40 | Max 0.80
Coloring options: