Motif IL_09979.1 Version IL_09979.1 of this group appears in releases 3.91 to 3.94
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | break | 11 | 12 | 13 | 14 | 15 | 16 | 17 | 18 | 1-18 | 2-17 | 3-16 | 4-5 | 5-15 | 6-14 | 9-12 | 10-11 | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_6UFM_002 | 6UFM | 0.0000 | 0 | 10x8 Sarcin-Ricin; G-bulge | B | RNA (98-MER) | U | 64 | C | 65 | A | 66 | G | 67 | U | 68 | A | 69 | G | 70 | A | 71 | A | 72 | C | 73 | * | G | 34 | A | 35 | A | 36 | G | 37 | A | 38 | A | 39 | C | 40 | G | 41 | cWW | tSH | tHH | cSH | tWH | tHS | cWw | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UCAGUAGAAC*GAAGAACG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| CAGUAGAA*AAGAAC | 1 |
- Annotations
-
- 10x8 Sarcin-Ricin; G-bulge (1)
- Basepair signature
- cWW-tSH-tHH-cSH-tWH-tHS-R-L-cWW-L-cWW
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: