#SLoop idPDBDisc#Non-coreAnnotationChain(s)Standardized name 1 2 3break 4 5 61-63-4
1 IL_4V88_3954V880.00000Isolated non-canonical cWW contactA6 SSU rRNAU150G151U152*A162G163A164cWWcWW
2 IL_4J39_0014J390.25850Isolated non-canonical cWW pairBRNA (19-mer)G9C10C11*G9||||4_555C10||||4_555C11||||4_555cWWcWW

3D structures

Complete motif including flanking bases
SequenceCounts
UGU*AGA1
GCC*GCC1
Non-Watson-Crick part of the motif
SequenceCounts
G*G1
C*C1

Release history

Release3.483.493.503.513.523.53
Date2021-08-182021-09-152021-10-132021-11-102021-12-082022-01-05
StatusNew id, 2 parentsExact matchExact matchExact matchExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • Isolated non-canonical cWW pair (1)
  • Isolated non-canonical cWW contact (1)
  • Basepair signature
    cWW-L-R-cWW
    Heat map statistics
    Min 0.26 | Avg 0.13 | Max 0.26
    Help

    Coloring options:

    IL_4V88_395:IL_4V88_395 = 0IL_4V88_395:IL_4J39_001 = 0.2585IL_4J39_001:IL_4V88_395 = 0.2585IL_4J39_001:IL_4J39_001 = 0IL_4V88_395IL_4J39_001Discrepancy0.000.050.100.150.200.25
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