Motif IL_10846.1 Version IL_10846.1 of this group appears in releases 3.18 to 3.26
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | break | 4 | 5 | 6 | 7 | 8 | 1-6 | 1-8 | 2-5 | 2-7 | 3-4 | 6-7 | 6-8 | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_4WF9_114 | 4WF9 | 0.0000 | 0 | Y | 5S rRNA | C | 28 | C | 29 | U | 30 | * | A | 48 | G | 49 | A | 50 | A | 51 | G | 52 | ncBW | cWW | ncWW | ncSW | cWW | ncSH | |
| 2 | IL_5J7L_021 | 5J7L | 0.7824 | 1 | AA | SSU rRNA | C | 440 | A | 441 | G | 442 | * | C | 492 | A | 493 | G | 494 | A | 496 | G | 497 | cWW | ncWw | cWW | ncSH |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CCU*AGAAG | 1 |
| CAG*CAGAAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| C*GAA | 1 |
| A*AGAA | 1 |
Release history
| Release | 3.18 | 3.19 | 3.20 | 3.21 | 3.22 | 3.23 | 3.24 | 3.25 | 3.26 |
|---|---|---|---|---|---|---|---|---|---|
| Date | 2019-05-03 | 2019-05-31 | 2019-06-28 | 2019-07-26 | 2019-08-23 | 2019-09-19 | 2019-10-16 | 2019-11-13 | 2019-12-11 |
| Status | New id, 2 parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-bif-cSH-cSW-cWW-cWW
- Heat map statistics
- Min 0.78 | Avg 0.39 | Max 0.78
Coloring options: