Motif IL_11167.3 Version IL_11167.3 of this group appears in releases 0.5 to 0.6
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | break | 7 | 8 | 9 | 10 | 11 | 12 | 13 | 14 | 1-14 | 3-10 | 4-9 | 5-8 | 6-7 | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_2NZ4_006 | 2NZ4 | 0.0648 | 1 | Q | GlmS ribozyme | U | 96 | A | 98 | A | 99 | A | 100 | U | 101 | C | 102 | * | G | 119 | G | 120 | A | 121 | C | 122 | A | 123 | A | 124 | A | 125 | G | 126 | cWW | tHW | tHW | cBW | cWW |
| 2 | IL_2NZ4_009 | 2NZ4 | 0.0664 | 1 | R | GlmS ribozyme | U | 96 | A | 98 | A | 99 | A | 100 | U | 101 | C | 102 | * | G | 119 | G | 120 | A | 121 | C | 122 | A | 123 | A | 124 | A | 125 | G | 126 | cWW | tHW | tHW | cBW | cWW |
| 3 | IL_2NZ4_013 | 2NZ4 | 0.0000 | 1 | S | GlmS ribozyme | U | 96 | A | 98 | A | 99 | A | 100 | U | 101 | C | 102 | * | G | 119 | G | 120 | A | 121 | C | 122 | A | 123 | A | 124 | A | 125 | G | 126 | cWW | tHW | tHW | cBW | cWW |
| 4 | IL_2NZ4_003 | 2NZ4 | 0.0608 | 1 | P | GlmS ribozyme | U | 96 | A | 98 | A | 99 | A | 100 | U | 101 | C | 102 | * | G | 119 | G | 120 | A | 121 | C | 122 | A | 123 | A | 124 | A | 125 | G | 126 | cWW | tHW | tHW | cBW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UUAAAUC*GGACAAAG | 4 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UAAAU*GACAAA | 4 |
Release history
Parent motifs
| Parent motif | Common motif instances | Only in IL_11167.3 | Only in the parent motif |
|---|---|---|---|
| IL_11167.2 Compare | IL_2NZ4_006, IL_2NZ4_013, IL_2NZ4_003, IL_2NZ4_009 | IL_2QBZ_005 |
Children motifs
| Child motif | Common motif instances | Only in IL_11167.3 | Only in the child motif |
|---|---|---|---|
| IL_21495.1 Compare | IL_2NZ4_013, IL_2NZ4_009 | IL_2NZ4_006, IL_2NZ4_003 |
- Annotations
-
- (4)
- Basepair signature
- 14_cWW--tHW-tHW-bif-cWW
- Heat map statistics
- Min 0.05 | Avg 0.05 | Max 0.08
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