Motif IL_11399.1 Version IL_11399.1 of this group appears in releases 3.93 to 3.94
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | break | 6 | 7 | 8 | 9 | 1-9 | 2-8 | 5-6 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_9J6P_001 | 9J6P | 0.0000 | 0 | B+A | RNA (22-mer) | A | 16 | G | 17 | G | 18 | A | 19 | C | 20 | * | G | 6 | G | 7 | G | 8 | U | 9 | cWW | cHW | cWW |
| 2 | IL_9J6P_002 | 9J6P | 0.1694 | 0 | A+B | RNA (22-mer) | A | 16 | G | 17 | G | 18 | A | 19 | C | 20 | * | G | 6 | G | 7 | G | 8 | U | 9 | cWW | cHW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| AGGAC*GGGU | 2 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GGA*GG | 2 |
- Annotations
-
- (2)
- Basepair signature
- cWW-cHW-L-R-L-cWW
- Heat map statistics
- Min 0.17 | Avg 0.08 | Max 0.17
Coloring options: