Motif IL_12040.1 Version IL_12040.1 of this group appears in releases 2.0 to 2.0
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | break | 8 | 9 | 10 | 11 | 12 | 13 | 1-13 | 5-10 | 6-9 | 7-8 | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_3J9W_090 | 3J9W | 0 | 0 | BA | LSU rRNA | G | 891 | U | 892 | A | 893 | A | 894 | G | 895 | A | 896 | G | 897 | * | C | 975 | U | 976 | U | 977 | A | 978 | U | 979 | C | 980 | cWW | ncWW | ncWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GUAAGAG*CUUAUC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UAAGA*UUAU | 1 |
Release history
| Release | 2.0 |
|---|---|
| Date | 2017-04-24 |
| Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (1)
- Basepair signature
- cWW-L-L-tWS-L-R-R-R-L-cWW
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: