Motif IL_16165.1 Version IL_16165.1 of this group appears in releases 3.20 to 3.24
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | break | 3 | 4 | 1-4 | 2-3 | ||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_4V9F_070 | 4V9F | 0.0000 | 2 | Bulged stacked bases | 0 | LSU rRNA | G | 1974 | C | 1975 | * | G | 2005 | U | 2008 | cWW | cWW |
| 2 | IL_4V9F_025 | 4V9F | 0.3206 | 1 | Single bulged A | 0 | LSU rRNA | A | 788 | C | 789 | * | G | 856 | U | 858 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GC*GCAU | 1 |
| AC*GAU | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| *CA | 1 |
| *A | 1 |
- Annotations
-
- Single bulged A (1)
- Bulged stacked bases (1)
- Basepair signature
- cWW-cWW
- Heat map statistics
- Min 0.32 | Avg 0.16 | Max 0.32
Coloring options: