Motif IL_16209.1 Version IL_16209.1 of this group appears in releases 3.33 to 3.45
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | break | 5 | 6 | 7 | 8 | 1-8 | 2-7 | 3-6 | 4-5 | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_3BNR_011 | 3BNR | 0.0000 | 1 | C+D | A site of human mitochondrial ribosome, chain one + A site of human mitochondrial ribosome, chain three | G | 15 | C | 16 | A | 17 | G | 19 | * | C | 5 | A | 6 | C | 7 | C | 8 | cWW | cWW | ||
| 2 | IL_5J7L_287 | 5J7L | 0.6444 | 1 | DA | LSU rRNA | G | 1202 | U | 1203 | A | 1204 | G | 1206 | * | U | 1240 | A | 1241 | U | 1242 | C | 1243 | cWW | cwW | tHH | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GCAAG*CACC | 1 |
| GUAAG*UAUC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| CAA*AC | 1 |
| UAA*AU | 1 |
Release history
| Release | 3.33 | 3.34 | 3.35 | 3.36 | 3.37 | 3.38 | 3.39 | 3.40 | 3.41 | 3.42 | 3.43 | 3.44 | 3.45 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2020-06-24 | 2020-07-22 | 2020-08-19 | 2020-09-16 | 2020-10-14 | 2020-11-11 | 2020-12-09 | 2021-01-06 | 2021-02-03 | 2021-03-03 | 2021-03-31 | 2021-04-28 | 2021-05-26 |
| Status | New id, 2 parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-cWW-tHH-cWW
- Heat map statistics
- Min 0.64 | Avg 0.32 | Max 0.64
Coloring options: