Motif IL_16407.1 Version IL_16407.1 of this group appears in releases 4.10 to 4.10
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name for chain | 1 | 2 | 3 | break | 4 | 5 | 1-5 | 3-4 | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_4LFB_007 | 4LFB | 0.4718 | 1 | Multiple bulged bases | A | SSU rRNA | U | 129 | A | 130 | C | 131 | * | G | 231 | G | 232 | cWW | cWW |
| 2 | IL_9I0V_003 | 9I0V | 0.0000 | 0 | C | A SELEX-derived artificial RNA aptamer | G | 9 | A | 10 | G | 11 | * | C | 23 | C | 24 | cWW | cWW | |
| 3 | IL_8OI5_099 | 8OI5 | 0.3862 | 0 | Single bulged A (H) | 1 | LSU rRNA | C | 2597 | A | 2598 | C | 2599 | * | G | 2586 | G | 2587 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UGAC*GG | 1 |
| GAG*CC | 1 |
| CAC*GG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| A* | 2 |
| GA* | 1 |
Release history
| Release | 4.10 |
|---|---|
| Date | 2026-05-20 |
| Status | New id, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- Multiple bulged bases (1)
- Single bulged A (H) (1)
- (1)
- Basepair signature
- cWW-L-cWW
- Heat map statistics
- Min 0.39 | Avg 0.30 | Max 0.48
Coloring options: