Motif IL_16593.2 Version IL_16593.2 of this group appears in releases 3.19 to 3.19
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name for chain | 1 | 2 | break | 3 | 4 | 1-4 | 2-3 | ||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_4V9F_041 | 4V9F | 0.0000 | 1 | Single bulged G | 0 | LSU rRNA | U | 1136 | G | 1138 | * | C | 1225 | G | 1226 | cWW | cWW |
| 2 | IL_4V9F_095 | 4V9F | 0.7826 | 3 | Bulged stacked bases | 0 | LSU rRNA | A | 2746 | G | 2750 | * | U | 2732 | U | 2733 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UGG*CG | 1 |
| ACGUG*UU | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| G* | 1 |
| CGU* | 1 |
Release history
| Release | 3.19 |
|---|---|
| Date | 2019-05-31 |
| Status | Updated, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- Single bulged G (1)
- Bulged stacked bases (1)
- Basepair signature
- cWW-cWW
- Heat map statistics
- Min 0.78 | Avg 0.39 | Max 0.78
Coloring options: