Motif IL_17157.1 Version IL_17157.1 of this group appears in releases 3.91 to 3.94

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Pairwise interactions
Sequence variants
History

#S	Loop id	PDB	Disc	#Non-core	Chain(s)	Standardized name		1		2		3		4		5		6		7		8		9	break		10		11		12		13		14		15		16		17	1-17	2-16	3-15	4-14	5-13	6-12	8-11	9-10
1	IL_3GS5_002	3GS5	0.0000	3	C	RNA (36-MER)	G	31	A	32	G	33	A	34	A	35	A	36	C	37	A	38	C	39	*	G	48	G	49	A	51	A	53	U	54	A	56	C	57	C	58	cWW	cWWa	tSH	tHW	ncBW	ntWH	cWW	cWW
2	IL_3BBM_002	3BBM	0.0915	3	B+C	Loop A and Loop B Ribozyme strand + Loop B S-turn strand	G	19	A	20	G	21	A	22	A	23	A	24	C	25	A	26	C	27	*	G	35	G	36	C	38	A	40	U	41	A	43	C	44	C	45	cWW	cWWa	tSH	tHW	tHW		cWW	cWW

3D structures

Complete motif including flanking bases

Sequence	Counts
GAGAAACAC*GGUACAUUACC	1
GAGAAACAC*GGUCCAUUACC	1

Non-Watson-Crick part of the motif

Sequence	Counts
AGAAACA*GUACAUUAC	1
AGAAACA*GUCCAUUAC	1

Release history

Release	3.91	3.92	3.93	3.94
Date	2024-12-04	2025-01-01	2025-01-29	2025-02-26
Status	New id, 1 parent	Exact match	Exact match	Exact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.

Annotations: (2)
Basepair signature: cWW-cWW-tSH-tHW-L-R-L-R-L-cWW-cWW
Heat map statistics: Min 0.09 | Avg 0.05 | Max 0.09

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