Motif IL_17268.1 Version IL_17268.1 of this group appears in releases 0.10 to 0.10
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | break | 3 | 4 | 5 | 1-2 | 1-5 | 2-3 | 3-5 | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_1XJR_004 | 1XJR | 0 | 1 | 180 degree turn | A | s2m RNA | G | 19 | C | 20 | * | G | 28 | A | 29 | C | 31 | ncsS | cWW | cWW | ncsS |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GC*GAUC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| *AU | 1 |
Release history
| Release | 0.10 |
|---|---|
| Date | 2013-02-17 |
| Status | New id, 1 parent |
Parent motifs
| Parent motif | Common motif instances | Only in IL_17268.1 | Only in the parent motif |
|---|---|---|---|
| IL_80755.1 Compare | IL_1XJR_004 | IL_1S72_017 |
Children motifs
| Child motif | Common motif instances | Only in IL_17268.1 | Only in the child motif |
|---|---|---|---|
| IL_62499.4 Compare | IL_1XJR_004 | IL_2AW7_057, IL_1FJG_050 |
- Annotations
-
- 180 degree turn (1)
- Basepair signature
- cWW-cSS-cSS-R-cWW
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: