Motif IL_17409.1 Version IL_17409.1 of this group appears in releases 2.0 to 2.0
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | break | 8 | 9 | 10 | 11 | 12 | 13 | 1-13 | 3-12 | 4-11 | 5-9 | 5-10 | 6-9 | 7-8 | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_3JAM_010 | 3JAM | 0 | 0 | 2 | SSU rRNA | U | 117 | U | 118 | A | 119 | U | 120 | U | 121 | U | 122 | G | 123 | * | C | 293 | A | 294 | U | 295 | U | 296 | C | 297 | A | 298 | cWW | ntHS | ncWw | ncWW | cWw | ncWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UUAUUUG*CAUUCA | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UAUUU*AUUC | 1 |
Release history
| Release | 2.0 |
|---|---|
| Date | 2017-04-24 |
| Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (1)
- Basepair signature
- cWW-tSH-tHS-L-R-cWW-L-R-cWW
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: