Motif IL_18369.1 Version IL_18369.1 of this group appears in releases 3.2 to 3.6
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | break | 4 | 5 | 6 | 7 | 8 | 1-8 | 3-4 | 6-7 | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_5J7L_254 | 5J7L | 0.1359 | 0 | DA | LSU rRNA | U | 293 | A | 294 | G | 295 | * | C | 343 | A | 344 | A | 345 | A | 346 | A | 347 | cWW | cWW | cSH |
| 2 | IL_4Y4O_190 | 4Y4O | 0.0000 | 0 | 2A | LSU rRNA | U | 293 | A | 294 | G | 295 | * | C | 343 | G | 344 | A | 345 | A | 346 | A | 347 | cWW | cWW | cSH |
| 3 | IL_4WF9_014 | 4WF9 | 0.4137 | 0 | X | LSU rRNA | U | 336 | A | 337 | G | 338 | * | C | 386 | G | 387 | A | 388 | A | 389 | A | 390 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UAG*CGAAA | 2 |
| UAG*CAAAA | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| A*GAA | 2 |
| A*AAA | 1 |
- Annotations
-
- (3)
- Basepair signature
- cWW-cSH-tHS-cWW
- Heat map statistics
- Min 0.14 | Avg 0.21 | Max 0.42
Coloring options: