Motif IL_18782.1 Version IL_18782.1 of this group appears in releases 3.2 to 3.2
#S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | 1 | 2 | break | 3 | 4 | 1-4 | 2-3 | ||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | IL_5J7L_341 | 5J7L | 0.5034 | 2 | DA | C | 2512 | A | 2513 | * | U | 2571 | G | 2574 | cWW | cWW | |
2 | IL_4IOA_099 | 4IOA | 0.0000 | 3 | Multiple bulged bases (H) | X | C | 2674 | U | 2675 | * | A | 2690 | G | 2694 | cWW | cWW |
3 | IL_4V5O_112 | 4V5O | 0.4808 | 5 | BA | G | 610 | A | 616 | * | U | 1076 | C | 1077 | cWW | cWW | |
4 | IL_3SN2_002 | 3SN2 | 0.5765 | 1 | Single bulged C | B | G | 13 | C | 14 | * | G | 18 | C | 20 | cWW | cWW |
3D structures
Complete motif including flanking bases
Sequence | Counts |
---|---|
CA*UACG | 1 |
CU*ACAUG | 1 |
GUUAAAA*UC | 1 |
GC*GCC | 1 |
Non-Watson-Crick part of the motif
Sequence | Counts |
---|---|
*AC | 1 |
*CAU | 1 |
UUAAA* | 1 |
*C | 1 |
Release history
Release | 3.2 |
---|---|
Date | 2018-09-26 |
Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Single bulged C (1)
- Multiple bulged bases (H) (1)
- Basepair signature
- cWW-cWW
- Heat map statistics
- Min 0.48 | Avg 0.48 | Max 0.96
Coloring options: