Motif IL_18782.1 Version IL_18782.1 of this group appears in releases 3.2 to 3.2
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name for chain | 1 | 2 | break | 3 | 4 | 1-4 | 2-3 | ||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_5J7L_341 | 5J7L | 0.5034 | 2 | DA | LSU rRNA | C | 2512 | A | 2513 | * | U | 2571 | G | 2574 | cWW | cWW | |
| 2 | IL_4IOA_099 | 4IOA | 0.0000 | 3 | Multiple bulged bases (H) | X | LSU rRNA | C | 2674 | U | 2675 | * | A | 2690 | G | 2694 | cWW | cWW |
| 3 | IL_4V5O_112 | 4V5O | 0.4808 | 5 | BA | SSU rRNA | G | 610 | A | 616 | * | U | 1076 | C | 1077 | cWW | cWW | |
| 4 | IL_3SN2_002 | 3SN2 | 0.5765 | 1 | Single bulged C | B | IRE II | G | 13 | C | 14 | * | G | 18 | C | 20 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CA*UACG | 1 |
| CU*ACAUG | 1 |
| GUUAAAA*UC | 1 |
| GC*GCC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| *AC | 1 |
| *CAU | 1 |
| UUAAA* | 1 |
| *C | 1 |
Release history
| Release | 3.2 |
|---|---|
| Date | 2018-09-26 |
| Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Single bulged C (1)
- Multiple bulged bases (H) (1)
- Basepair signature
- cWW-cWW
- Heat map statistics
- Min 0.48 | Avg 0.48 | Max 0.96
Coloring options: