Motif IL_18824.3 Version IL_18824.3 of this group appears in releases 4.10 to 4.10
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | break | 5 | 6 | 1-6 | 4-5 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_8OI5_083 | 8OI5 | 0.2632 | 0 | 1 | LSU rRNA | C | 2076 | A | 2077 | A | 2078 | C | 2079 | * | G | 1943 | G | 1944 | cWW | cWW |
| 2 | IL_9H3G_090 | 9H3G | 0.1475 | 0 | A | LSU rRNA | C | 2097 | A | 2098 | G | 2099 | C | 2100 | * | G | 1949 | G | 1950 | cWW | cWW |
| 3 | IL_9PN5_079 | 9PN5 | 0.0000 | 0 | A1 | LSU rRNA | C | 2098 | A | 2099 | A | 2100 | C | 2101 | * | G | 1947 | G | 1948 | cWW | cWW |
| 4 | IL_8GLP_110 | 8GLP | 0.1330 | 0 | L5 | LSU rRNA | C | 3602 | G | 3603 | A | 3604 | C | 3605 | * | G | 2896 | G | 2897 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CAAC*GG | 2 |
| CAGC*GG | 1 |
| CGAC*GG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AA* | 2 |
| AG* | 1 |
| GA* | 1 |
Release history
| Release | 4.10 |
|---|---|
| Date | 2026-05-20 |
| Status | Updated, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (4)
- Basepair signature
- cWW-L-cWW-L
- Heat map statistics
- Min 0.13 | Avg 0.17 | Max 0.30
Coloring options: