Motif IL_19102.1 Version IL_19102.1 of this group appears in releases 3.98 to 3.99

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Pairwise interactions
Sequence variants
History

#S	Loop id	PDB	Disc	#Non-core	Chain(s)	Standardized name for chain		1		2		3		4	break		5		6		7	1-7	2-6	3-6	4-5
1	IL_9IWF_002	9IWF	0.0000	1	B	Purine riboswitch	C	58	C	59	A	61	G	62	*	C	40	A	41	G	42	cWW	ntWW		cWW
2	IL_4PMI_007	4PMI	0.3974	1	A	Rev-Response-Element RNA	U	41	A	42	A	44	U	45	*	A	75	G	76	G	77	cWW		cWW	cWW

3D structures

Complete motif including flanking bases

Sequence	Counts
CCCAG*CAG	1
UAUAU*AGG	1

Non-Watson-Crick part of the motif

Sequence	Counts
CCA*A	1
AUA*G	1

Release history

Release	3.98	3.99
Date	2025-06-18	2025-07-16
Status	New id, 1 parent	Exact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.

Annotations: (2)
Basepair signature: cWW-L-R-L-cWW
Heat map statistics: Min 0.40 | Avg 0.20 | Max 0.40

Help

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view

reading 625 atoms

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625 atoms created

ModelSet: autobonding; use autobond=false to not generate bonds automatically

Time for creating model: 48 ms

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Coloring options: Nucleotide numbers

Motif IL_19102.1 Version IL_19102.1 of this group appears in releases 3.98 to 3.99 Download Csv Json

3D structures

Complete motif including flanking bases

Non-Watson-Crick part of the motif

Release history

Parent motifs

Children motifs

Motif IL_19102.1 Version IL_19102.1 of this group appears in releases 3.98 to 3.99

Download

Csv

Json