Motif IL_19244.1 Version IL_19244.1 of this group appears in releases 3.7 to 3.17
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | break | 6 | 7 | 1-7 | 5-6 | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_2PN3_002 | 2PN3 | 0.0000 | 2 | A+B | RNA (24-mer) + RNA (20-mer) | G | 52 | A | 53 | A | 54 | A | 57 | C | 58 | * | G | 110 | C | 111 | cWW | cWW |
| 2 | IL_3PDR_001 | 3PDR | 0.9768 | 1 | X | M-box riboswitch (ykoK leader) | C | 163 | G | 164 | A | 165 | U | 167 | G | 168 | * | C | 21 | G | 22 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GAACUAC*GC | 1 |
| CGAUUG*CG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AACUA* | 1 |
| GAUU* | 1 |
Release history
| Release | 3.7 | 3.8 | 3.9 | 3.10 | 3.11 | 3.12 | 3.13 | 3.14 | 3.15 | 3.16 | 3.17 |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2018-06-29 | 2018-07-27 | 2018-08-24 | 2018-09-21 | 2018-10-19 | 2018-11-16 | 2018-12-14 | 2019-01-11 | 2019-02-08 | 2019-03-08 | 2019-04-05 |
| Status | New id, 2 parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-L-L-L-cWW
- Heat map statistics
- Min 0.98 | Avg 0.49 | Max 0.98
Coloring options: