#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3 4 5 6break 7 81-86-7
1 IL_4P97_0014P970.50812A+BRNA (16-mer) + RNA (11-mer)C5U6A7C8A11C12*G40G41cWWcWW
2 IL_3P59_0013P590.00001A+BRNA (15-mer) + RNA (10-mer)G52A53A54C55A57C58*G110C111cWWcWW
3 IL_2PN3_0022PN30.20571A+BRNA (24-mer) + RNA (20-mer)G52A53A54C55A57C58*G110C111cWWcWW

3D structures

Complete motif including flanking bases
SequenceCounts
GAACUAC*GC2
CUACCCAC*GG1
Non-Watson-Crick part of the motif
SequenceCounts
AACUA*2
UACCCA*1

Release history

Release3.263.273.283.293.303.313.323.333.343.353.363.373.383.393.403.413.423.433.443.453.463.473.483.493.503.513.523.533.543.553.563.573.583.593.603.613.623.633.643.653.663.673.683.693.703.713.723.733.743.753.76
Date2019-12-112020-01-082020-02-052020-03-042020-04-012020-04-292020-05-272020-06-242020-07-222020-08-192020-09-162020-10-142020-11-112020-12-092021-01-062021-02-032021-03-032021-03-312021-04-282021-05-262021-06-232021-07-212021-08-182021-09-152021-10-132021-11-102021-12-082022-01-052022-02-022022-03-022022-03-302022-04-272022-05-252022-06-222022-07-202022-08-172022-10-122022-11-092022-12-072023-01-042023-02-012023-03-012023-03-292023-04-262023-05-242023-06-212023-07-192023-08-162023-09-132023-10-112023-11-08
StatusUpdated, 2 parentsExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (3)
  • Basepair signature
    cWW-L-L-L-L-cWW
    Heat map statistics
    Min 0.21 | Avg 0.28 | Max 0.55
    Help

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