Motif IL_22863.1 Version IL_22863.1 of this group appears in releases 3.18 to 3.76

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Pairwise interactions
Sequence variants
History

#S	Loop id	PDB	Disc	#Non-core	Annotation	Chain(s)		1		2		3		4		5		6		7		8	break		9		10		11		12		13		14		15		16	1-16	2-15	3-14	4-13	5-12	6-11	6-12	7-10	8-9
1	IL_5TBW_005	5TBW	0.0000	1	tSH-tHW-tHH-tHS	1	C	31	U	32	G	33	A	34	A	35	C	36	U	37	U	38	*	A	45	U	46	C	47	A	48	U	50	A	51	A	52	G	53	cWW		tSH	tHW	tHH	tHS		cWw	cWW
2	IL_6CZR_138	6CZR	0.9189	2	tSH-tHW-tHH-tHS	1a	G	588	U	589	G	590	A	593	G	594	A	595	C	596	C	597	*	G	611	G	612	G	613	G	614	G	615	A	616	G	617	C	618	ncWW	ncWW	tSH				ncWW	ncWW	ncWW

3D structures

Complete motif including flanking bases

Sequence	Counts
CUGAACUU*AUCAAUAAG	1
GUGAAAGACC*GGGGGAGC	1

Non-Watson-Crick part of the motif

Sequence	Counts
UGAACU*UCAAUAA	1
UGAAAGAC*GGGGAG	1

Release history

Release	3.18	3.19	3.20	3.21	3.22	3.23	3.24	3.25	3.26	3.27	3.28	3.29	3.30	3.31	3.32	3.33	3.34	3.35	3.36	3.37	3.38	3.39	3.40	3.41	3.42	3.43	3.44	3.45	3.46	3.47	3.48	3.49	3.50	3.51	3.52	3.53	3.54	3.55	3.56	3.57	3.58	3.59	3.60	3.61	3.62	3.63	3.64	3.65	3.66	3.67	3.68	3.69	3.70	3.71	3.72	3.73	3.74	3.75	3.76
Date	2019-05-03	2019-05-31	2019-06-28	2019-07-26	2019-08-23	2019-09-19	2019-10-16	2019-11-13	2019-12-11	2020-01-08	2020-02-05	2020-03-04	2020-04-01	2020-04-29	2020-05-27	2020-06-24	2020-07-22	2020-08-19	2020-09-16	2020-10-14	2020-11-11	2020-12-09	2021-01-06	2021-02-03	2021-03-03	2021-03-31	2021-04-28	2021-05-26	2021-06-23	2021-07-21	2021-08-18	2021-09-15	2021-10-13	2021-11-10	2021-12-08	2022-01-05	2022-02-02	2022-03-02	2022-03-30	2022-04-27	2022-05-25	2022-06-22	2022-07-20	2022-08-17	2022-10-12	2022-11-09	2022-12-07	2023-01-04	2023-02-01	2023-03-01	2023-03-29	2023-04-26	2023-05-24	2023-06-21	2023-07-19	2023-08-16	2023-09-13	2023-10-11	2023-11-08
Status	New id, 1 parent	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.

Annotations: tSH-tHW-tHH-tHS (2)
Basepair signature: cWW-L-R-tSH-tHW-tHH-tHS-cWW-cWW
Heat map statistics: Min 0.92 | Avg 0.46 | Max 0.92

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