#SLoop idPDBDisc#Non-coreAnnotationChain(s)Standardized name 1 2 3 4 5 6 7 8break 9 10 11 12 13 14 15 161-162-153-144-135-126-116-127-108-9
1 IL_5TBW_0055TBW0.00001tSH-tHW-tHH-tHS1 LSU rRNAC31U32G33A34A35C36U37U38*A45U46C47A48U50A51A52G53cWWtSHtHWtHHtHScWwcWW
2 IL_6CZR_1386CZR0.91892tSH-tHW-tHH-tHS1a SSU rRNAG588U589G590A593G594A595C596C597*G611G612G613G614G615A616G617C618ncWWncWWtSHncWWncWWncWW

3D structures

Complete motif including flanking bases
SequenceCounts
CUGAACUU*AUCAAUAAG1
GUGAAAGACC*GGGGGAGC1
Non-Watson-Crick part of the motif
SequenceCounts
UGAACU*UCAAUAA1
UGAAAGAC*GGGGAG1

Release history

Release3.183.193.203.213.223.233.243.253.263.273.283.293.303.313.323.333.343.353.363.373.383.393.403.413.423.433.443.453.463.473.483.493.503.513.523.533.543.553.563.573.583.593.603.613.623.633.643.653.663.673.683.693.703.713.723.733.743.753.76
Date2019-05-032019-05-312019-06-282019-07-262019-08-232019-09-192019-10-162019-11-132019-12-112020-01-082020-02-052020-03-042020-04-012020-04-292020-05-272020-06-242020-07-222020-08-192020-09-162020-10-142020-11-112020-12-092021-01-062021-02-032021-03-032021-03-312021-04-282021-05-262021-06-232021-07-212021-08-182021-09-152021-10-132021-11-102021-12-082022-01-052022-02-022022-03-022022-03-302022-04-272022-05-252022-06-222022-07-202022-08-172022-10-122022-11-092022-12-072023-01-042023-02-012023-03-012023-03-292023-04-262023-05-242023-06-212023-07-192023-08-162023-09-132023-10-112023-11-08
StatusNew id, 1 parentExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • tSH-tHW-tHH-tHS (2)
  • Basepair signature
    cWW-L-R-tSH-tHW-tHH-tHS-cWW-cWW
    Heat map statistics
    Min 0.92 | Avg 0.46 | Max 0.92
    Help

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