Motif IL_22955.1 Version IL_22955.1 of this group appears in releases 3.7 to 3.11

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Pairwise interactions
Sequence variants
History

#S	Loop id	PDB	Disc	#Non-core	Annotation	Chain(s)	Standardized name		1		2	break		3		4	1-4	2-3
1	IL_1KXK_001	1KXK	0.5418	2		A	ai5g group II Self-splicing intron	G	61	G	62	*	U	8	C	11	cWW	cWW
2	IL_4V8P_189	4V8P	0.0000	1		D1	LSU rRNA	A	779	C	780	*	G	800	U	802	cWW	cWW
3	IL_4V9F_045	4V9F	0.2027	2	Bulged stacked bases	0	LSU rRNA	G	1269	U	1270	*	A	1286	C	1289	cWW	cWW
4	IL_4V8P_271	4V8P	0.6852	2		D1	LSU rRNA	C	2869	U	2870	*	A	2928	G	2931	cWW	cWW
5	IL_4WF9_096	4WF9	0.8755	2		X	LSU rRNA	C	2539	A	2540	*	U	2598	G	2601	cWW	cWW

3D structures

Complete motif including flanking bases

Sequence	Counts
GG*UAUC	1
AC*GUU	1
GU*AAUC	1
CU*AACG	1
CA*UACG	1

Non-Watson-Crick part of the motif

Sequence	Counts
*AU	2
*AC	2
*U	1

Release history

Release	3.7	3.8	3.9	3.10	3.11
Date	2018-06-29	2018-07-27	2018-08-24	2018-09-21	2018-10-19
Status	New id, > 2 parents	Exact match	Exact match	Exact match	Exact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.

Annotations: (4)
Bulged stacked bases (1)
Basepair signature: cWW-cWW
Heat map statistics: Min 0.20 | Avg 0.55 | Max 0.95

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