Motif IL_23836.1 Version IL_23836.1 of this group appears in releases 3.62 to 3.76
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | break | 6 | 7 | 8 | 9 | 10 | 1-10 | 2-9 | 3-8 | 4-7 | 5-6 | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_3IGI_010 | 3IGI | 0.0000 | 0 | A | Group IIC intron | G | 267 | A | 268 | G | 269 | G | 270 | U | 271 | * | A | 282 | A | 283 | G | 284 | U | 285 | C | 286 | cWW | tHW | tHS | cWW | cWW |
| 2 | IL_7V9E_002 | 7V9E | 0.7288 | 1 | A | RNA (68-MER) | G | 12 | A | 13 | C | 14 | C | 15 | C | 16 | * | G | 33 | A | 34 | C | 35 | A | 36 | C | 38 | cWW | ncWWa | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GAGGU*AAGUC | 1 |
| GACCC*GACAAC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AGG*AGU | 1 |
| ACC*ACAA | 1 |
Release history
| Release | 3.62 | 3.63 | 3.64 | 3.65 | 3.66 | 3.67 | 3.68 | 3.69 | 3.70 | 3.71 | 3.72 | 3.73 | 3.74 | 3.75 | 3.76 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2022-10-12 | 2022-11-09 | 2022-12-07 | 2023-01-04 | 2023-02-01 | 2023-03-01 | 2023-03-29 | 2023-04-26 | 2023-05-24 | 2023-06-21 | 2023-07-19 | 2023-08-16 | 2023-09-13 | 2023-10-11 | 2023-11-08 |
| Status | New id, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-tHW-tHS-cWW-cWW
- Heat map statistics
- Min 0.73 | Avg 0.36 | Max 0.73
Coloring options: