Motif IL_24671.1 Version IL_24671.1 of this group appears in releases 3.54 to 3.57
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | break | 4 | 5 | 6 | 1-6 | 3-4 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_4V88_395 | 4V88 | 0.0000 | 0 | Isolated non-canonical cWW contact | A6 | SSU rRNA | U | 150 | G | 151 | U | 152 | * | A | 162 | G | 163 | A | 164 | cWW | cWW |
| 2 | IL_4KNQ_003 | 4KNQ | 0.2684 | 0 | Isolated non-canonical cWW pair | B | RNA (20-mer) | C | 210 | C | 211 | G | 212 | * | C | 210||||4_555 | C | 211||||4_555 | G | 212||||4_555 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UGU*AGA | 1 |
| CCG*CCG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| G*G | 1 |
| C*C | 1 |
- Annotations
-
- Isolated non-canonical cWW pair (1)
- Isolated non-canonical cWW contact (1)
- Basepair signature
- cWW-L-R-cWW
- Heat map statistics
- Min 0.27 | Avg 0.13 | Max 0.27
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