Motif IL_24879.1 Version IL_24879.1 of this group appears in releases 3.18 to 3.19
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | break | 5 | 6 | 1-6 | 4-5 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_6AZ4_001 | 6AZ4 | 0.9315 | 0 | A+B | RNA (32-MER) + RNA (9-mer) | G | 9 | C | 10 | C | 11 | G | 12 | * | C | 32 | C | 1 | cWW | cWW |
| 2 | IL_3BNR_011 | 3BNR | 0.0000 | 3 | C+D | A site of human mitochondrial ribosome, chain one + A site of human mitochondrial ribosome, chain three | G | 15 | C | 16 | A | 17 | G | 19 | * | C | 5 | C | 8 | cWW | cWW |
| 3 | IL_5TBW_080 | 5TBW | 0.9171 | 0 | 1 | LSU rRNA | C | 2098 | A | 2099 | A | 2100 | C | 2101 | * | G | 1947 | G | 1948 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GCCG*CC | 1 |
| GCAAG*CACC | 1 |
| CAAC*GG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| CC* | 1 |
| CAA*AC | 1 |
| AA* | 1 |
- Annotations
-
- (3)
- Basepair signature
- cWW-R-R-cWW
- Heat map statistics
- Min 0.92 | Avg 0.63 | Max 0.99
Coloring options: