Motif IL_24905.1 Version IL_24905.1 of this group appears in releases 3.2 to 3.2
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | 1 | 2 | 3 | break | 4 | 5 | 6 | 7 | 1-7 | 2-5 | 2-6 | 3-4 | 6-7 | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_3MEI_004 | 3MEI | 0.1428 | 2 | A+B | G | 13 | C | 15 | G | 17 | * | C | 7 | G | 8 | C | 9 | C | 10 | cWW | cSW | cWW | ||
| 2 | IL_2O3V_003 | 2O3V | 0.0000 | 2 | A+B | A | 15 | A | 17 | G | 19 | * | C | 30 | G | 31 | C | 32 | U | 33 | cWW | cSW | cWW | ||
| 3 | IL_4IOA_061 | 4IOA | 0.9521 | 1 | X | U | 1515 | A | 1516 | C | 1517 | * | G | 1503 | G | 1504 | U | 1505 | A | 1507 | cWW | cWW | cWW | ncWH |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GCCUG*CGCC | 1 |
| AAAAG*CGCU | 1 |
| UAC*GGUCA | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| CCU*GC | 1 |
| AAA*GC | 1 |
| A*GUC | 1 |
Release history
| Release | 3.2 |
|---|---|
| Date | 2018-09-26 |
| Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (3)
- Basepair signature
- cWW-cSW-R-cWW
- Heat map statistics
- Min 0.14 | Avg 0.46 | Max 0.96
Coloring options: