Motif IL_24905.5 Version IL_24905.5 of this group appears in releases 3.27 to 3.36

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Pairwise interactions
Sequence variants
History

#S	Loop id	PDB	Disc	#Non-core	Chain(s)	Standardized name		1		2		3		4	break		5		6		7	1-7	2-6	3-4	3-6	4-5
1	IL_4IOA_061	4IOA	0.9521	1	X	LSU rRNA	G	1503	G	1504	U	1505	A	1507	*	U	1515	A	1516	C	1517	cWW	cWW	ncWH		cWW
2	IL_2O3V_003	2O3V	0.0000	2	B+A	RNA (23-mer)	C	30	G	31	C	32	U	33	*	A	15	A	17	G	19	cWW			cWS	cWW
3	IL_3MEI_004	3MEI	0.1428	2	B+A	RNA (23-mer)	C	7	G	8	C	9	C	10	*	G	13	C	15	G	17	cWW			cWS	cWW

3D structures

Complete motif including flanking bases

Sequence	Counts
GGUCA*UAC	1
CGCU*AAAAG	1
CGCC*GCCUG	1

Non-Watson-Crick part of the motif

Sequence	Counts
GUC*A	1
GC*AAA	1
GC*CCU	1

Release history

Release	3.27	3.28	3.29	3.30	3.31	3.32	3.33	3.34	3.35	3.36
Date	2020-01-08	2020-02-05	2020-03-04	2020-04-01	2020-04-29	2020-05-27	2020-06-24	2020-07-22	2020-08-19	2020-09-16
Status	Updated, 2 parents	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.

Annotations: (3)
Basepair signature: cWW-L-cWS-cWW
Heat map statistics: Min 0.14 | Avg 0.46 | Max 0.96

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