Motif IL_24905.6 Version IL_24905.6 of this group appears in releases 3.37 to 3.45
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | break | 4 | 5 | 6 | 7 | 1-7 | 2-6 | 3-4 | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_2O3V_003 | 2O3V | 0.0000 | 2 | A+B | RNA (23-mer) | A | 15 | A | 17 | G | 19 | * | C | 30 | G | 31 | C | 32 | U | 33 | cWW | cSW | cWW |
| 2 | IL_3MEI_004 | 3MEI | 0.1428 | 2 | A+B | RNA (23-mer) | G | 13 | C | 15 | G | 17 | * | C | 7 | G | 8 | C | 9 | C | 10 | cWW | cSW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| AAAAG*CGCU | 1 |
| GCCUG*CGCC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AAA*GC | 1 |
| CCU*GC | 1 |
Release history
| Release | 3.37 | 3.38 | 3.39 | 3.40 | 3.41 | 3.42 | 3.43 | 3.44 | 3.45 |
|---|---|---|---|---|---|---|---|---|---|
| Date | 2020-10-14 | 2020-11-11 | 2020-12-09 | 2021-01-06 | 2021-02-03 | 2021-03-03 | 2021-03-31 | 2021-04-28 | 2021-05-26 |
| Status | Updated, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-cSW-R-cWW
- Heat map statistics
- Min 0.14 | Avg 0.07 | Max 0.14
Coloring options: