Motif IL_27580.1 Version IL_27580.1 of this group appears in releases 4.10 to 4.10
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | break | 7 | 8 | 9 | 10 | 11 | 1-11 | 2-10 | 3-9 | 4-8 | 4-9 | 5-8 | 6-7 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_5XTM_002 | 5XTM | 0.0000 | 1 | Other IL | B | RNA (47-MER) | G | 8 | A | 9 | U | 10 | G | 11 | A | 12 | A | 14 | * | U | 35 | A | 36 | A | 37 | C | 38 | C | 39 | cWW | ncWWa | tSH | cBW | cWW | ||
| 2 | IL_9H3G_081 | 9H3G | 0.9892 | 0 | A | LSU rRNA | U | 1703 | G | 1704 | C | 1705 | C | 1706 | C | 1707 | A | 1708 | * | U | 1738 | C | 1739 | C | 1740 | A | 1741 | G | 1742 | cWW | tSH | ntHW | cBW | ncBW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GAUGAAA*UAACC | 1 |
| UGCCCA*UCCAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AUGAA*AAC | 1 |
| GCCC*CCA | 1 |
Release history
| Release | 4.10 |
|---|---|
| Date | 2026-05-20 |
| Status | New id, 2 parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- Other IL (1)
- (1)
- Basepair signature
- cWW-L-R-L-R-L-R-L-cWW
- Heat map statistics
- Min 0.99 | Avg 0.49 | Max 0.99
Coloring options: