Motif IL_27601.1 Version IL_27601.1 of this group appears in releases 3.15 to 3.17
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | break | 4 | 5 | 6 | 1-6 | 2-5 | 3-4 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_6GSL_341 | 6GSL | 0.0000 | 0 | 1K | tRNA | C | 2 | A | 3 | U | 4 | * | A | 70 | U | 71 | G | 72 | cWW | ntHS | cWW | |
| 2 | IL_4KNQ_003 | 4KNQ | 0.5630 | 0 | Isolated non-canonical cWW pair | B | RNA (20-mer) | C | 210 | C | 211 | G | 212 | * | C | 210||||4_555 | C | 211||||4_555 | G | 212||||4_555 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CAU*AUG | 1 |
| CCG*CCG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| A*U | 1 |
| C*C | 1 |
- Annotations
-
- Isolated non-canonical cWW pair (1)
- (1)
- Basepair signature
- cWW-tHS-cWW
- Heat map statistics
- Min 0.56 | Avg 0.28 | Max 0.56
Coloring options: