Motif IL_27603.1 Version IL_27603.1 of this group appears in releases 2.0 to 2.0
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | break | 4 | 5 | 6 | 7 | 8 | 1-8 | 3-4 | 6-7 | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_5FDU_013 | 5FDU | 0.0000 | 0 | 1A | LSU rRNA | U | 317 | A | 318 | G | 319 | * | C | 367 | G | 368 | A | 369 | A | 370 | A | 371 | cWW | cWW | cSH |
| 2 | IL_5J7L_254 | 5J7L | 0.1456 | 0 | DA | LSU rRNA | U | 293 | A | 294 | G | 295 | * | C | 343 | A | 344 | A | 345 | A | 346 | A | 347 | cWW | cWW | cSH |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UAG*CGAAA | 1 |
| UAG*CAAAA | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| A*GAA | 1 |
| A*AAA | 1 |
Release history
| Release | 2.0 |
|---|---|
| Date | 2017-04-24 |
| Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-L-cSH-R-cWW
- Heat map statistics
- Min 0.15 | Avg 0.07 | Max 0.15
Coloring options: