Motif IL_27825.1 Version IL_27825.1 of this group appears in releases 3.11 to 3.17
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | break | 5 | 6 | 1-6 | 4-5 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_6AZ4_001 | 6AZ4 | 0.0000 | 0 | A+B | RNA (32-MER) + RNA (9-mer) | G | 9 | C | 10 | C | 11 | G | 12 | * | C | 32 | C | 1 | cWW | cWW | |
| 2 | IL_255D_001 | 255D | 0.5686 | 2 | Tandem non-canonical cWW pairs | A | RNA (12-mer) | U | 5||||2_656 | U | 6||||2_656 | C | 7||||2_656 | G | 8||||2_656 | * | U | 5 | G | 8 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GCCG*CC | 1 |
| UUCG*UUCG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| CC* | 1 |
| UC*UC | 1 |
Release history
| Release | 3.11 | 3.12 | 3.13 | 3.14 | 3.15 | 3.16 | 3.17 |
|---|---|---|---|---|---|---|---|
| Date | 2018-10-19 | 2018-11-16 | 2018-12-14 | 2019-01-11 | 2019-02-08 | 2019-03-08 | 2019-04-05 |
| Status | New id, 2 parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- Tandem non-canonical cWW pairs (1)
- (1)
- Basepair signature
- cWW-L-L-cWW
- Heat map statistics
- Min 0.57 | Avg 0.28 | Max 0.57
Coloring options: