Motif IL_28003.3 Version IL_28003.3 of this group appears in releases 2.0 to 2.0
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | break | 6 | 7 | 8 | 1-8 | 2-7 | 3-4 | 5-6 | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_3Q1Q_009 | 3Q1Q | 0.1790 | 1 | Receptor of 11-nt loop-receptor motif | C | TRNA (PHE) | C | 44 | U | 45 | A | 46 | A | 47 | G | 48 | * | U | 32 | A | 33 | G | 35 | cWW | tWH | ncSH | cWW |
| 2 | IL_5BTM_002 | 5BTM | 0.0000 | 1 | Receptor of 11-nt loop-receptor motif | A | RNA (55-mer) | C | 19 | U | 20 | A | 21 | A | 22 | G | 23 | * | U | 34 | A | 35 | G | 37 | cWW | tWH | cSH | cWW |
| 3 | IL_4K27_004 | 4K27 | 0.0508 | 1 | Receptor of 11-nt loop-receptor motif | U | Myotonic Dystrophy Type 2 RNA | C | 19 | U | 20 | A | 21 | A | 22 | G | 23 | * | U | 34 | A | 35 | G | 37 | cWW | tWH | cSH | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CUAAG*UAUG | 3 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UAA*AU | 3 |
Release history
| Release | 2.0 |
|---|---|
| Date | 2017-04-24 |
| Status | Updated, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- Receptor of 11-nt loop-receptor motif (3)
- Basepair signature
- cWW-tWH-cSH-cWW
- Heat map statistics
- Min 0.05 | Avg 0.10 | Max 0.21
Coloring options: