Motif IL_28202.1 Version IL_28202.1 of this group appears in releases 3.12 to 3.14
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | break | 6 | 7 | 8 | 1-8 | 5-6 | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_4V9F_015 | 4V9F | 0.0000 | 1 | 0 | LSU rRNA | U | 548 | C | 550 | A | 551 | A | 552 | G | 553 | * | C | 606 | G | 607 | A | 608 | cWW | cWW |
| 2 | IL_5J7L_013 | 5J7L | 0.9770 | 0 | AA | SSU rRNA | G | 203 | G | 204 | A | 205 | C | 206 | C | 207 | * | G | 212 | G | 213 | C | 214 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UACAAG*CGA | 1 |
| GGACC*GGC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| ACAA*G | 1 |
| GAC*G | 1 |
- Annotations
-
- (2)
- Basepair signature
- cWW-L-R-L-L-cWW
- Heat map statistics
- Min 0.98 | Avg 0.49 | Max 0.98
Coloring options: