Motif IL_31461.1 Version IL_31461.1 of this group appears in releases 3.89 to 3.89
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | 1 | 2 | 3 | 4 | 5 | break | 6 | 7 | 1-3 | 1-7 | 2-6 | 4-7 | 5-6 | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_6CZR_127 | 6CZR | 0.1812 | 0 | C-loop | 1a | G | 367 | C | 368 | A | 369 | A | 370 | U | 371 | * | A | 385 | C | 386 | cWW | tWH | cWS | cWW | |
| 2 | IL_4LFB_015 | 4LFB | 0.1767 | 0 | C-loop | A | G | 371 | C | 372 | A | 373 | A | 374 | U | 375 | * | A | 389 | C | 390 | cWW | ntWH | cWS | cWW | |
| 3 | IL_8C3A_416 | 8C3A | 0.1324 | 0 | C-loop | CM | C | 441 | C | 442 | A | 443 | A | 444 | U | 445 | * | A | 458 | G | 459 | cSH | cWW | tWH | cWS | cWW |
| 4 | IL_5J7L_018 | 5J7L | 0.0000 | 0 | C-loop | AA | A | 371 | C | 372 | A | 373 | A | 374 | U | 375 | * | A | 389 | U | 390 | cSH | cWW | tWH | cWS | cWW |
| 5 | IL_4LFB_013 | 4LFB | 0.6415 | 0 | C-loop | A | U | 304 | G | 305 | G | 306 | C | 307 | C | 308 | * | G | 292 | G | 293 | cWW | cWW | |||
| 6 | IL_6CZR_125 | 6CZR | 0.6987 | 0 | C-loop | 1a | U | 300 | G | 301 | G | 302 | C | 303 | C | 304 | * | G | 288 | G | 289 | cWW | cWW | |||
| 7 | IL_5J7L_016 | 5J7L | 0.7072 | 0 | C-loop | AA | U | 304 | G | 305 | A | 306 | C | 307 | C | 308 | * | G | 292 | G | 293 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GCAAU*AC | 2 |
| UGGCC*GG | 2 |
| CCAAU*AG | 1 |
| ACAAU*AU | 1 |
| UGACC*GG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| CAA* | 4 |
| GGC* | 2 |
| GAC* | 1 |
Release history
| Release | 3.89 |
|---|---|
| Date | 2024-10-09 |
| Status | New id, 2 parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- C-loop (7)
- Basepair signature
- cWW-cWS-tWH-cWW-L
- Heat map statistics
- Min 0.13 | Avg 0.41 | Max 0.75
Coloring options: