Motif IL_32376.2 Version IL_32376.2 of this group appears in releases 4.7 to 4.7
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 7 | break | 8 | 9 | 10 | 11 | 1-11 | 2-10 | 3-7 | 7-8 | 9-10 | 9-11 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_9H3G_228 | 9H3G | 0.2761 | 0 | h1 | SSU rRNA | A | 1409 | A | 1410 | G | 1411 | G | 1412 | A | 1413 | A | 1414 | G | 1415 | * | C | 1392 | U | 1393 | A | 1394 | U | 1395 | cWW | cWw | tWH | cWW | ncSH | |
| 2 | IL_8B0X_052 | 8B0X | 0.0000 | 0 | A | SSU rRNA | G | 1175 | A | 1176 | G | 1177 | G | 1178 | A | 1179 | A | 1180 | G | 1181 | * | C | 1158 | U | 1159 | G | 1160 | C | 1161 | cWW | cWW | tWH | cWW | cSH | |
| 3 | IL_4LFB_050 | 4LFB | 0.1135 | 0 | A | SSU rRNA | G | 1175 | A | 1176 | G | 1177 | G | 1178 | A | 1179 | A | 1180 | G | 1181 | * | C | 1158 | U | 1159 | G | 1160 | C | 1161 | cWW | cWW | ntWH | cWW | cSH |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GAGGAAG*CUGC | 2 |
| AAGGAAG*CUAU | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AGGAA*UG | 2 |
| AGGAA*UA | 1 |
Release history
| Release | 4.7 |
|---|---|
| Date | 2026-02-25 |
| Status | Updated, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (3)
- Basepair signature
- cWW-cSH-cWW-tWH-L-cWW-L-L
- Heat map statistics
- Min 0.11 | Avg 0.16 | Max 0.31
Coloring options: