Motif IL_33025.1 Version IL_33025.1 of this group appears in releases 4.10 to 4.10
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 7 | break | 8 | 9 | 10 | 11 | 12 | 13 | 1-13 | 2-12 | 4-9 | 5-10 | 7-8 | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_9VSN_001 | 9VSN | 0.0000 | 0 | B+A | RNA (23-mer) | A | 15 | C | 16 | U | 17 | A | 18 | C | 19 | U | 20 | U | 21 | * | A | 5 | A | 6 | A | 7 | C | 8 | A | 9 | U | 10 | cWW | cWW | cWW | ||
| 2 | IL_9VSN_002 | 9VSN | 0.6927 | 0 | A+B | RNA (23-mer) | A | 15 | C | 16 | U | 17 | A | 18 | C | 19 | U | 20 | U | 21 | * | A | 5 | A | 6 | A | 7 | C | 8 | A | 9 | U | 10 | cWW | cWW | ntHH | ncBW | ncWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| ACUACUU*AAACAU | 2 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| CUACU*AACA | 2 |
Release history
| Release | 4.10 |
|---|---|
| Date | 2026-05-20 |
| Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-cWW-L-R-L-R-L-R-L-cWW
- Heat map statistics
- Min 0.69 | Avg 0.35 | Max 0.69
Coloring options: