Motif IL_34166.2 Version IL_34166.2 of this group appears in releases 3.19 to 3.19
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | break | 3 | 4 | 1-4 | 2-3 | ||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_4V9F_025 | 4V9F | 0.6684 | 1 | Single bulged A | 0 | LSU rRNA | A | 788 | C | 789 | * | G | 856 | U | 858 | cWW | cWW |
| 2 | IL_4Y4O_276 | 4Y4O | 0.0000 | 1 | 2A | LSU rRNA | C | 2591 | G | 2592 | * | C | 2601 | G | 2603 | cWW | cWW | |
| 3 | IL_5CNR_002 | 5CNR | 0.2364 | 1 | Single bulged A | A+B | RNA (16-mer) + RNA (11-mer) | C | 12 | C | 13 | * | G | 38 | G | 40 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| AC*GAU | 1 |
| CG*CAG | 1 |
| CC*GAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| *A | 3 |
Release history
| Release | 3.19 |
|---|---|
| Date | 2019-05-31 |
| Status | Updated, 2 parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- Single bulged A (2)
- (1)
- Basepair signature
- cWW-cWW
- Heat map statistics
- Min 0.24 | Avg 0.37 | Max 0.78
Coloring options: