Motif IL_34378.1 Version IL_34378.1 of this group appears in releases 3.12 to 3.17
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | break | 5 | 6 | 1-6 | 4-5 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_4V88_403 | 4V88 | 0.0000 | 2 | A6 | SSU rRNA | U | 318 | U | 319 | G | 322 | A | 323 | * | U | 345 | G | 346 | cWW | cWW |
| 2 | IL_4V9F_016 | 4V9F | 0.5895 | 0 | 0 | LSU rRNA | A | 602 | A | 603 | G | 604 | C | 605 | * | G | 554 | U | 555 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UUUCGA*UG | 1 |
| AAGC*GU | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UUCG* | 1 |
| AG* | 1 |
- Annotations
-
- (2)
- Basepair signature
- cWW-L-L-cWW
- Heat map statistics
- Min 0.59 | Avg 0.29 | Max 0.59
Coloring options: