Motif IL_34915.2 Version IL_34915.2 of this group appears in releases 3.12 to 3.76

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Pairwise interactions
Sequence variants
History

#S	Loop id	PDB	Disc	#Non-core	Annotation	Chain(s)		1		2		3		4		5	break		6		7		8		9	1-9	2-7	3-4	4-8	5-6
1	IL_1NBS_008	1NBS	0.1864	0	Receptor of 11-nt loop-receptor motif	B	C	146	U	147	A	148	C	149	G	150	*	U	159	A	160	U	161	G	162	cWW	tWH	ncSH		cWW
2	IL_1KXK_002	1KXK	0.0000	0	Receptor of 11-nt loop-receptor motif	A	C	15	U	16	A	17	A	18	G	19	*	U	54	A	55	U	56	G	57	cWW	tWH	cSH		cWW
3	IL_1U6B_003	1U6B	0.2596	0	Receptor of 11-nt loop-receptor motif	B	C	61	U	62	A	63	A	64	G	65	*	U	80	A	81	U	82	G	83	cWW	tWH	cSH	ncWW	cWW
4	IL_3IGI_012	3IGI	0.2751	0	Receptor of 11-nt loop-receptor motif	A	C	346	U	347	A	348	A	349	G	350	*	U	332	A	333	U	334	G	335	cWW	tWH	cSH	ncWW	cWW

3D structures

Complete motif including flanking bases

Sequence	Counts
CUAAG*UAUG	3
CUACG*UAUG	1

Non-Watson-Crick part of the motif

Sequence	Counts
UAA*AU	3
UAC*AU	1

Release history

Release	3.12	3.13	3.14	3.15	3.16	3.17	3.18	3.19	3.20	3.21	3.22	3.23	3.24	3.25	3.26	3.27	3.28	3.29	3.30	3.31	3.32	3.33	3.34	3.35	3.36	3.37	3.38	3.39	3.40	3.41	3.42	3.43	3.44	3.45	3.46	3.47	3.48	3.49	3.50	3.51	3.52	3.53	3.54	3.55	3.56	3.57	3.58	3.59	3.60	3.61	3.62	3.63	3.64	3.65	3.66	3.67	3.68	3.69	3.70	3.71	3.72	3.73	3.74	3.75	3.76
Date	2018-11-16	2018-12-14	2019-01-11	2019-02-08	2019-03-08	2019-04-05	2019-05-03	2019-05-31	2019-06-28	2019-07-26	2019-08-23	2019-09-19	2019-10-16	2019-11-13	2019-12-11	2020-01-08	2020-02-05	2020-03-04	2020-04-01	2020-04-29	2020-05-27	2020-06-24	2020-07-22	2020-08-19	2020-09-16	2020-10-14	2020-11-11	2020-12-09	2021-01-06	2021-02-03	2021-03-03	2021-03-31	2021-04-28	2021-05-26	2021-06-23	2021-07-21	2021-08-18	2021-09-15	2021-10-13	2021-11-10	2021-12-08	2022-01-05	2022-02-02	2022-03-02	2022-03-30	2022-04-27	2022-05-25	2022-06-22	2022-07-20	2022-08-17	2022-10-12	2022-11-09	2022-12-07	2023-01-04	2023-02-01	2023-03-01	2023-03-29	2023-04-26	2023-05-24	2023-06-21	2023-07-19	2023-08-16	2023-09-13	2023-10-11	2023-11-08
Status	Updated, 1 parent	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.

Annotations: Receptor of 11-nt loop-receptor motif (4)
Basepair signature: cWW-R-tWH-cSH-cWW
Heat map statistics: Min 0.19 | Avg 0.20 | Max 0.34

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Coloring options: Nucleotide numbers

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