Motif IL_35092.2 Version IL_35092.2 of this group appears in releases 4.14 to 4.14
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | break | 6 | 7 | 8 | 9 | 10 | 1-10 | 2-9 | 3-8 | 4-7 | 5-6 | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_8CRE_392 | 8CRE | 0.1069 | 1 | Triple sheared related (H) | CM | SSU rRNA | U | 37 | C | 38 | A | 39 | A | 40 | A | 41 | * | U | 464 | G | 465 | C | 467 | A | 468 | A | 469 | cWW | cWW | tSH | tHS | cWW |
| 2 | IL_9SUM_139 | 9SUM | 0.1039 | 1 | CA | SSU rRNA | U | 37 | C | 38 | A | 39 | A | 40 | A | 41 | * | U | 455 | G | 456 | C | 458 | A | 459 | A | 460 | cWW | cWW | tSH | cWW | ||
| 3 | IL_9PN5_144 | 9PN5 | 0.0668 | 1 | B5 | SSU rRNA | U | 37 | C | 38 | A | 39 | A | 40 | A | 41 | * | PSU | 466 | G | 467 | C | 469 | A | 470 | A | 471 | cWW | cWW | tSH | tHS | cWW | |
| 4 | IL_9H3G_157 | 9H3G | 0.0000 | 1 | h1 | SSU rRNA | U | 37 | OMC | 38 | A | 39 | A | 40 | A | 41 | * | PSU | 468 | G | 469 | OMC | 471 | A | 472 | A | 473 | cWW | cWW | tSH | tHS | cWW | |
| 5 | IL_6ZDP_003 | 6ZDP | 0.5775 | 1 | Other IL | B | Chains: B | A | 1298 | C | 1299 | U | 1300 | U | 1301 | C | 1302 | * | G | 1313 | U | 1314 | U | 1315 | G | 1317 | U | 1318 | ncWW | ncWw | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UCAAA*UGACAA | 2 |
| UCAAA*(PSU)GACAA | 1 |
| U(OMC)AAA*(PSU)GA(OMC)AA | 1 |
| ACUUC*GUUUGU | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| CAA*GACA | 3 |
| (OMC)AA*GA(OMC)A | 1 |
| CUU*UUUG | 1 |
Release history
| Release | 4.14 |
|---|---|
| Date | 2026-09-09 |
| Status | Updated, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (3)
- Other IL (1)
- Triple sheared related (H) (1)
- Basepair signature
- cWW-cWW-tSH-tHS-cWW
- Heat map statistics
- Min 0.07 | Avg 0.24 | Max 0.63
Coloring options: