Motif IL_35240.1 Version IL_35240.1 of this group appears in releases 3.18 to 3.32
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | break | 4 | 5 | 6 | 7 | 1-7 | 2-5 | 3-4 | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_3PDR_002 | 3PDR | 0.0000 | 1 | X | M-box riboswitch (ykoK leader) | U | 23 | A | 25 | G | 26 | * | U | 159 | C | 160 | U | 161 | A | 162 | cWW | tHS | cWW |
| 2 | IL_3V7E_005 | 3V7E | 0.8099 | 3 | C | SAM-I riboswitch | U | 96 | G | 100 | C | 101 | * | G | 114 | A | 115 | A | 116 | A | 117 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UUAG*UCUA | 1 |
| UCCUGC*GAAA | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UA*CU | 1 |
| CCUG*AA | 1 |
Release history
| Release | 3.18 | 3.19 | 3.20 | 3.21 | 3.22 | 3.23 | 3.24 | 3.25 | 3.26 | 3.27 | 3.28 | 3.29 | 3.30 | 3.31 | 3.32 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2019-05-03 | 2019-05-31 | 2019-06-28 | 2019-07-26 | 2019-08-23 | 2019-09-19 | 2019-10-16 | 2019-11-13 | 2019-12-11 | 2020-01-08 | 2020-02-05 | 2020-03-04 | 2020-04-01 | 2020-04-29 | 2020-05-27 |
| Status | New id, 2 parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-R-tHS-cWW
- Heat map statistics
- Min 0.81 | Avg 0.40 | Max 0.81
Coloring options: