Motif IL_35279.1 Version IL_35279.1 of this group appears in releases 1.18 to 1.18
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | break | 10 | 11 | 12 | 13 | 14 | 15 | 16 | 17 | 18 | 1-18 | 2-17 | 5-13 | 6-7 | 7-12 | 8-11 | 9-10 | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_4TZZ_003 | 4TZZ | 0.0000 | 0 | C | G | 15 | A | 16 | A | 17 | G | 18 | A | 19 | G | 20 | U | 21 | A | 22 | U | 23 | * | A | 83 | G | 84 | A | 85 | A | 86 | G | 87 | G | 88 | C | 89 | A | 90 | C | 91 | cWW | ncwW | tHH | cSH | tWH | tHS | ncWW |
| 2 | IL_4TZZ_007 | 4TZZ | 0.1402 | 0 | F | G | 15 | A | 16 | A | 17 | G | 18 | A | 19 | G | 20 | U | 21 | A | 22 | U | 23 | * | A | 83 | G | 84 | A | 85 | A | 86 | G | 87 | G | 88 | C | 89 | A | 90 | C | 91 | cWW | ncwW | tHH | ncSH | tWH | ntHS | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GAAGAGUAU*AGAAGGCAC | 2 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AAGAGUA*GAAGGCA | 2 |
Release history
| Release | 1.18 |
|---|---|
| Date | 2014-10-07 |
| Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-L-R-R-R-R-L-L-tHH-cSH-tWH-tHS-cWW
- Heat map statistics
- Min 0.14 | Avg 0.07 | Max 0.14
Coloring options: