Motif IL_35820.1 Version IL_35820.1 of this group appears in releases 2.0 to 2.0
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 | break | 13 | 14 | 15 | 16 | 17 | 18 | 19 | 20 | 21 | 22 | 1-22 | 4-6 | 5-20 | 11-14 | 12-13 | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_5AN9_020 | 5AN9 | 0 | 0 | N | LSU rRNA | G | 2472 | A | 2473 | A | 2474 | U | 2475 | G | 2476 | U | 2477 | C | 2478 | A | 2479 | A | 2480 | A | 2481 | G | 2482 | U | 2483 | * | A | 2494 | A | 2495 | C | 2496 | C | 2497 | U | 2498 | A | 2499 | G | 2500 | C | 2501 | A | 2502 | C | 2503 | cWW | cwW | cWW | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GAAUGUCAAAGU*AACCUAGCAC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AAUGUCAAAG*ACCUAGCA | 1 |
Release history
| Release | 2.0 |
|---|---|
| Date | 2017-04-24 |
| Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (1)
- Basepair signature
- cWW-L-R-L-cWW-cWW-R-R-R-R-R-L-L-L-L-cWW-cWW
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: