Motif IL_36143.1 Version IL_36143.1 of this group appears in releases 3.2 to 3.11
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | break | 3 | 4 | 5 | 1-5 | 2-3 | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_5J7L_058 | 5J7L | 0.0790 | 2 | AA | SSU rRNA | C | 1399 | G | 1401 | * | C | 1501 | A | 1502 | G | 1504 | cWW | cWW |
| 2 | IL_4V88_463 | 4V88 | 0.0000 | 2 | A6 | SSU rRNA | C | 1636 | G | 1638 | * | C | 1764 | A | 1765 | G | 1767 | cWW | cWW |
| 3 | IL_4V5O_157 | 4V5O | 0.1931 | 2 | BA | SSU rRNA | C | 1608 | G | 1610 | * | C | 1717 | A | 1718 | G | 1720 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CCG*CAAG | 3 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| C*AA | 3 |
Release history
| Release | 3.3 | 3.4 | 3.5 | 3.6 | 3.7 | 3.8 | 3.9 | 3.10 | 3.2 | 3.11 |
|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2018-03-08 | 2018-04-06 | 2018-05-04 | 2018-06-01 | 2018-06-29 | 2018-07-27 | 2018-08-24 | 2018-09-21 | 2018-09-26 | 2018-10-19 |
| Status | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | New id, no parents | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (3)
- Basepair signature
- cWW-R-cWW
- Heat map statistics
- Min 0.08 | Avg 0.11 | Max 0.21
Coloring options: