Motif IL_36175.1 Version IL_36175.1 of this group appears in releases 4.0 to 4.0
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name for chain | 1 | 2 | 3 | break | 4 | 5 | 1-5 | 3-4 | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_6XJQ_007 | 6XJQ | 0.3087 | 1 | A | Self-alkylating ribozyme (58-MER) | C | 23 | U | 25 | G | 26 | * | C | 35 | G | 36 | cWW | cWW | |
| 2 | IL_8GLP_007 | 8GLP | 0.0000 | 1 | L5 | LSU rRNA | C | 118 | A | 120 | A | 121 | * | U | 152 | G | 153 | cWW | cWW | |
| 3 | IL_8B0X_088 | 8B0X | 0.2298 | 1 | Stack outside cWW (H) | a | LSU rRNA | G | 932 | U | 934 | A | 935 | * | U | 849 | C | 850 | cWW | cWW |
| 4 | IL_9E6Q_014 | 9E6Q | 0.2910 | 1 | 1 | LSU rRNA | G | 388 | G | 390 | U | 391 | * | A | 305 | C | 306 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CUUG*CG | 1 |
| CGAA*UG | 1 |
| GUUA*UC | 1 |
| GAGU*AC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UU* | 2 |
| GA* | 1 |
| AG* | 1 |
Release history
| Release | 4.0 |
|---|---|
| Date | 2025-08-13 |
| Status | New id, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (3)
- Stack outside cWW (H) (1)
- Basepair signature
- cWW-L-cWW
- Heat map statistics
- Min 0.23 | Avg 0.23 | Max 0.40
Coloring options: