Motif IL_36321.1 Version IL_36321.1 of this group appears in releases 1.18 to 1.18
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | break | 6 | 7 | 8 | 9 | 10 | 11 | 12 | 13 | 14 | 15 | 16 | 17 | 18 | 19 | 20 | 21 | 22 | 23 | 2-21 | 4-18 | 5-6 | 7-17 | 8-16 | 16-20 | |||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_4W21_131 | 4W21 | 0 | 1 | 5 | 28S ribosomal RNA | A | 4239 | G | 4240 | C | 4241 | U | 4242 | C | 4243 | * | G | 4267 | A | 4268 | G | 4269 | C | 4270 | A | 4271 | G | 4272 | A | 4273 | A | 4274 | G | 4275 | G | 4276 | G | 4277 | C | 4278 | A | 4279 | A | 4281 | A | 4282 | G | 4283 | C | 4284 | U | 4285 | cWw | tWS | cWW | ncBW | ncWw | tsS |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| AGCUC*GAGCAGAAGGGCAAAAGCU | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GCU*AGCAGAAGGGCAAAAGC | 1 |
Release history
| Release | 1.18 |
|---|---|
| Date | 2014-10-07 |
| Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (1)
- Basepair signature
- cWW-tHW-bif-L-tSS-tWH-tWS-R-bif-tWH-R-R-R-R-R-cWW
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: