Motif IL_36940.2 Version IL_36940.2 of this group appears in releases 3.89 to 3.89
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | 1 | 2 | 3 | 4 | break | 5 | 6 | 7 | 8 | 1-8 | 2-7 | 3-6 | 4-5 | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_5UNE_005 | 5UNE | 0.2120 | 0 | tSH-tHW | A+B | G | 21 | C | 22 | A | 23 | C | 24 | * | G | 21 | C | 22 | A | 23 | C | 24 | cWW | ncSW | ntHW | cWW |
| 2 | IL_7LO9_003 | 7LO9 | 0.0000 | 0 | A+B | C | 3 | G | 4 | ZAD | 5 | A | 6 | * | 5BU | 7 | U | 8 | A | 9 | G | 10 | cWW | tSH | ntWW | cWW | |
| 3 | IL_7LO9_004 | 7LO9 | 0.2608 | 0 | B+A | C | 3 | G | 4 | ZAD | 5 | A | 6 | * | 5BU | 7 | U | 8 | A | 9 | G | 10 | cWW | tSH | tWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CG(ZAD)A*(5BU)UAG | 2 |
| GCAC*GCAC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| G(ZAD)*UA | 2 |
| CA*CA | 1 |
Release history
| Release | 3.89 |
|---|---|
| Date | 2024-10-09 |
| Status | Updated, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- tSH-tHW (1)
- Basepair signature
- cWW-cWW-tWW-tSH-cWW
- Heat map statistics
- Min 0.21 | Avg 0.20 | Max 0.42
Coloring options: