Motif IL_36973.1 Version IL_36973.1 of this group appears in releases 3.2 to 3.2
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | break | 8 | 9 | 10 | 11 | 12 | 13 | 14 | 1-14 | 2-13 | 5-10 | 6-9 | 7-8 | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_2OIU_002 | 2OIU | 0.7082 | 0 | P | L1 Ribozyme RNA Ligase | C | 21 | G | 22 | A | 23 | C | 24 | C | 25 | A | 26 | G | 27 | * | C | 34 | U | 35 | C | 36 | U | 37 | U | 38 | A | 39 | G | 40 | cWW | tSH | ncwW | cWW | cWW |
| 2 | IL_4V8P_248 | 4V8P | 0.0000 | 0 | D1 | LSU rRNA | U | 2206 | C | 2207 | A | 2208 | A | 2209 | A | 2210 | G | 2211 | U | 2212 | * | A | 2223 | A | 2224 | C | 2225 | C | 2226 | A | 2227 | A | 2228 | G | 2229 | cWW | ntSH | ncWW | cWW | |
| 3 | IL_4V9F_069 | 4V9F | 0.2797 | 0 | 0 | LSU rRNA | U | 1907 | G | 1908 | A | 1909 | A | 1910 | C | 1911 | A | 1912 | C | 1913 | * | G | 1926 | A | 1927 | C | 1928 | G | 1929 | A | 1930 | A | 1931 | G | 1932 | cWW | tSH | ncWw | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CGACCAG*CUCUUAG | 1 |
| UCAAAGU*AACCAAG | 1 |
| UGAACAC*GACGAAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GACCA*UCUUA | 1 |
| CAAAG*ACCAA | 1 |
| GAACA*ACGAA | 1 |
Release history
| Release | 3.2 |
|---|---|
| Date | 2018-09-26 |
| Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (3)
- Basepair signature
- cWW-tSH-R-tHS-L-bif-cWW-cWW
- Heat map statistics
- Min 0.28 | Avg 0.38 | Max 0.72
Coloring options: